species:   Cocin
pid:       PID1279
parent:    cci-milR-24
paralog:   
locus:     scaffold_302:7795-7849
matures:   ['UGAAUCGCUAUCUCCGAUGGU', 'CGUCCGAGAUUCCGAGUCACUGACUG']
srr:       SRR9972089
genome:    /Users/jax/+Genomes/Fungal_genomes/Cocin.Copci_AmutBmut1_AssemblyScaffolds.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Lau2020-gn.SRR9972089.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Lau2020-gn.SRR9972089.cram scaffold_302:7795-7849

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

*****************             ************************ 
UGAAUCGCUAUCUCCGAUGGUCUGUCUCCGUCCGAGAUUCCGAGUCACUGACUGG
(((.(((..(((((.(((((.......))))).)))))..))).)))........
UGAAUCGCUAUCUCCGAUGGU---------------------------------- l=21 a=0 c
----------------------------CGUCCGAGAUUCCGAGUCACUGACUG- l=26 a=0 c*
UGAAUCGCUAUCUCCGAUGGU---------------------------------- l=21 a=0 ma
----------------------------CGUCCGAGAUUCCGAGUCACUGACUG- l=26 a=0 ma*


No alignments to locus

mb-00010
ax-1001011
ku-01
ss-000110001000
fn-001
